WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C05D11.7b Sequence Name  C05D11.7b
Length (nt)  2256   Chromosome Location  III: 6416147-6416489
Chromosome . Primary Identifier  III Chromosome Location . Start  6416147
Chromosome Location . End  6416489
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30480 ATGL-1, isoform b 83.7 751 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00095486
WBRNAi00001764
WBRNAi00039740
WBRNAi00010199
WBRNAi00005312
WBRNAi00114383
WBRNAi00114385
WBRNAi00114384
WBRNAi00103125
WBRNAi00103126
WBRNAi00103091
WBRNAi00028498
WBRNAi00114379
WBRNAi00114381
WBRNAi00114380
WBRNAi00102900
WBRNAi00103094
WBRNAi00102764
WBRNAi00103673
WBRNAi00112360
WBRNAi00102557
WBRNAi00102722
WBRNAi00103090
WBRNAi00103131
WBRNAi00103133
WBRNAi00103132
WBRNAi00102878
WBRNAi00102895
WBRNAi00102902
WBRNAi00102791

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C05D11.7b 6416147 6416489 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015484 atgl-1 C05D11.7 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C05D11.7b 6416147 6416489 -1
CDS:C05D11.7b 6416672 6417253 -1
CDS:C05D11.7b 6417454 6417754 -1
CDS:C05D11.7b 6417803 6417906 -1
CDS:C05D11.7b 6417955 6418120 -1
CDS:C05D11.7b 6418201 6418631 -1
CDS:C05D11.7b 6419126 6419454 -1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C05D11.7b.1 C05D11.7b.1 2634   III: 6415774-6419459