WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D11.8.1 Sequence Name  C05D11.8.1
Length (nt)  4380   Chromosome Location  III: 6420770-6427305
Chromosome . Primary Identifier  III Chromosome Location . Start  6420770
Chromosome Location . End  6427305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015485 C05D11.8 C05D11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D11.8 C05D11.8 2691   III: 6422459-6422591

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.8.1 6420770 6427305 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92252   1822   III: 6420770-6422591 Caenorhabditis elegans
Exon92253   75   III: 6423292-6423366 Caenorhabditis elegans
Exon92254   137   III: 6423861-6423997 Caenorhabditis elegans
Exon92255   710   III: 6424041-6424750 Caenorhabditis elegans
Exon92256   103   III: 6424801-6424903 Caenorhabditis elegans
Exon92257   162   III: 6425671-6425832 Caenorhabditis elegans
Exon92258   207   III: 6425885-6426091 Caenorhabditis elegans
Exon92259   1164   III: 6426142-6427305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.8.1 6420770 6427305 -1

1 Sequence

Length
4380

1 Sequence Ontology Term

Identifier Name Description
transcript