WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05D11.10.1 Sequence Name  C05D11.10.1
Length (nt)  600   Chromosome Location  III: 6431042-6431798
Chromosome . Primary Identifier  III Chromosome Location . Start  6431042
Chromosome Location . End  6431798 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05D11.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015487 mrps-17 C05D11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05D11.10 C05D11.10 483   III: 6431153-6431450

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.10.1 6431042 6431798 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92270   409   III: 6431042-6431450 Caenorhabditis elegans
Exon92271   80   III: 6431560-6431639 Caenorhabditis elegans
Exon92272   111   III: 6431688-6431798 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05D11.10.1 6431042 6431798 -1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript