WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T26A5.5a Sequence Name  T26A5.5a
Length (nt)  3450   Chromosome Location  III: 6454483-6454796
Chromosome . Primary Identifier  III Chromosome Location . Start  6454483
Chromosome Location . End  6454796
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A5.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50209 JHDM-1, isoform a 131.5 1149 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00001278
WBRNAi00007358
WBRNAi00054167
WBRNAi00007660
WBRNAi00019240
WBRNAi00005484
WBRNAi00087727
WBRNAi00035980
WBRNAi00064106
WBRNAi00091523

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T26A5.5a 6454483 6454796 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020821 jhdm-1 T26A5.5 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:T26A5.5a 6454483 6454796 1
CDS:T26A5.5a 6454845 6454976 1
CDS:T26A5.5a 6455027 6455603 1
CDS:T26A5.5a 6455652 6455901 1
CDS:T26A5.5a 6456020 6456154 1
CDS:T26A5.5a 6456200 6456276 1
CDS:T26A5.5a 6456332 6456574 1
CDS:T26A5.5a 6457416 6457460 1
CDS:T26A5.5a 6457525 6458301 1
CDS:T26A5.5a 6458353 6458545 1
CDS:T26A5.5a 6458602 6459011 1
CDS:T26A5.5a 6459060 6459271 1
CDS:T26A5.5a 6459320 6459404 1

1 Sequence

Length
3450

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T26A5.5a.1 T26A5.5a.1 4060   III: 6454483-6460014