WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26A5.2d.1 Sequence Name  T26A5.2d.1
Length (nt)  2136   Chromosome Location  III: 6468278-6471291
Chromosome . Primary Identifier  III Chromosome Location . Start  6468278
Chromosome Location . End  6471291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A5.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020819 T26A5.2 T26A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26A5.2d T26A5.2d 2136   III: 6468278-6468673

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2d.1 6468278 6471291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92412   396   III: 6468278-6468673 Caenorhabditis elegans
Exon92418   180   III: 6468718-6468897 Caenorhabditis elegans
Exon92426   207   III: 6468950-6469156 Caenorhabditis elegans
Exon92434   262   III: 6469648-6469909 Caenorhabditis elegans
Exon92442   113   III: 6469959-6470071 Caenorhabditis elegans
Exon92452   119   III: 6470125-6470243 Caenorhabditis elegans
Exon92458   436   III: 6470299-6470734 Caenorhabditis elegans
Exon92466   145   III: 6470777-6470921 Caenorhabditis elegans
Exon92472   164   III: 6470971-6471134 Caenorhabditis elegans
Exon92480   114   III: 6471178-6471291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2d.1 6468278 6471291 1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript