WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26A5.2c.1 Sequence Name  T26A5.2c.1
Length (nt)  2499   Chromosome Location  III: 6468278-6471645
Chromosome . Primary Identifier  III Chromosome Location . Start  6468278
Chromosome Location . End  6471645 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A5.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020819 T26A5.2 T26A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26A5.2c T26A5.2c 2145   III: 6468278-6468673

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2c.1 6468278 6471645 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92414   396   III: 6468278-6468673 Caenorhabditis elegans
Exon92417   180   III: 6468718-6468897 Caenorhabditis elegans
Exon92425   207   III: 6468950-6469156 Caenorhabditis elegans
Exon92433   262   III: 6469648-6469909 Caenorhabditis elegans
Exon92441   113   III: 6469959-6470071 Caenorhabditis elegans
Exon92448   128   III: 6470116-6470243 Caenorhabditis elegans
Exon92457   436   III: 6470299-6470734 Caenorhabditis elegans
Exon92465   145   III: 6470777-6470921 Caenorhabditis elegans
Exon92471   164   III: 6470971-6471134 Caenorhabditis elegans
Exon92486   468   III: 6471178-6471645 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2c.1 6468278 6471645 1

1 Sequence

Length
2499

1 Sequence Ontology Term

Identifier Name Description
transcript