WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26A5.2f.1 Sequence Name  T26A5.2f.1
Length (nt)  2535   Chromosome Location  III: 6467337-6471291
Chromosome . Primary Identifier  III Chromosome Location . Start  6467337
Chromosome Location . End  6471291 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26A5.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020819 T26A5.2 T26A5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26A5.2f T26A5.2f 2535   III: 6467337-6467672

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2f.1 6467337 6471291 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92442   336   III: 6467337-6467672 Caenorhabditis elegans
Exon92446   450   III: 6468224-6468673 Caenorhabditis elegans
Exon92458   180   III: 6468718-6468897 Caenorhabditis elegans
Exon92466   207   III: 6468950-6469156 Caenorhabditis elegans
Exon92474   262   III: 6469648-6469909 Caenorhabditis elegans
Exon92482   113   III: 6469959-6470071 Caenorhabditis elegans
Exon92487   128   III: 6470116-6470243 Caenorhabditis elegans
Exon92498   436   III: 6470299-6470734 Caenorhabditis elegans
Exon92506   145   III: 6470777-6470921 Caenorhabditis elegans
Exon92511   164   III: 6470971-6471134 Caenorhabditis elegans
Exon92520   114   III: 6471178-6471291 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26A5.2f.1 6467337 6471291 1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
transcript