WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F23F12.8.1 Sequence Name  F23F12.8.1
Length (nt)  3382   Chromosome Location  III: 6483218-6489314
Chromosome . Primary Identifier  III Chromosome Location . Start  6483218
Chromosome Location . End  6489314 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F23F12.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017754 chtb-2 F23F12.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F23F12.8 F23F12.8 2943   III: 6483218-6483269

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F23F12.8.1 6483218 6489314 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92506   52   III: 6483218-6483269 Caenorhabditis elegans
Exon92507   161   III: 6484754-6484914 Caenorhabditis elegans
Exon92508   635   III: 6485162-6485796 Caenorhabditis elegans
Exon92509   217   III: 6485971-6486187 Caenorhabditis elegans
Exon92510   796   III: 6486237-6487032 Caenorhabditis elegans
Exon92511   262   III: 6487445-6487706 Caenorhabditis elegans
Exon92512   210   III: 6487750-6487959 Caenorhabditis elegans
Exon92513   175   III: 6488126-6488300 Caenorhabditis elegans
Exon92514   141   III: 6488348-6488488 Caenorhabditis elegans
Exon92515   162   III: 6488535-6488696 Caenorhabditis elegans
Exon92516   571   III: 6488744-6489314 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F23F12.8.1 6483218 6489314 1

1 Sequence

Length
3382

1 Sequence Ontology Term

Identifier Name Description
transcript