WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E7.4.1 Sequence Name  C09E7.4.1
Length (nt)  1983   Chromosome Location  III: 6534488-6536995
Chromosome . Primary Identifier  III Chromosome Location . Start  6534488
Chromosome Location . End  6536995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015638 C09E7.4 C09E7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E7.4 C09E7.4 1923   III: 6534542-6534848

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.4.1 6534488 6536995 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92597   361   III: 6534488-6534848 Caenorhabditis elegans
Exon92598   86   III: 6534896-6534981 Caenorhabditis elegans
Exon92599   144   III: 6535032-6535175 Caenorhabditis elegans
Exon92600   315   III: 6535284-6535598 Caenorhabditis elegans
Exon92601   167   III: 6535643-6535809 Caenorhabditis elegans
Exon92602   127   III: 6535857-6535983 Caenorhabditis elegans
Exon92603   174   III: 6536030-6536203 Caenorhabditis elegans
Exon92604   106   III: 6536248-6536353 Caenorhabditis elegans
Exon92605   183   III: 6536398-6536580 Caenorhabditis elegans
Exon92606   116   III: 6536630-6536745 Caenorhabditis elegans
Exon92607   204   III: 6536792-6536995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.4.1 6534488 6536995 -1

1 Sequence

Length
1983

1 Sequence Ontology Term

Identifier Name Description
transcript