WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E7.7b.1 Sequence Name  C09E7.7b.1
Length (nt)  3164   Chromosome Location  III: 6546731-6551242
Chromosome . Primary Identifier  III Chromosome Location . Start  6546731
Chromosome Location . End  6551242 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015641 C09E7.7 C09E7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E7.7b C09E7.7b 2781   III: 6546910-6547183

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7b.1 6546731 6551242 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92638   453   III: 6546731-6547183 Caenorhabditis elegans
Exon92643   213   III: 6547233-6547445 Caenorhabditis elegans
Exon92647   42   III: 6547490-6547531 Caenorhabditis elegans
Exon92651   102   III: 6547577-6547678 Caenorhabditis elegans
Exon92655   93   III: 6547726-6547818 Caenorhabditis elegans
Exon92659   63   III: 6547864-6547926 Caenorhabditis elegans
Exon92663   105   III: 6547970-6548074 Caenorhabditis elegans
Exon92667   415   III: 6548122-6548536 Caenorhabditis elegans
Exon92671   127   III: 6548580-6548706 Caenorhabditis elegans
Exon92675   309   III: 6548793-6549101 Caenorhabditis elegans
Exon92679   213   III: 6549149-6549361 Caenorhabditis elegans
Exon92683   204   III: 6549409-6549612 Caenorhabditis elegans
Exon92687   279   III: 6549867-6550145 Caenorhabditis elegans
Exon92691   150   III: 6550369-6550518 Caenorhabditis elegans
Exon92695   105   III: 6550565-6550669 Caenorhabditis elegans
Exon92699   194   III: 6550740-6550933 Caenorhabditis elegans
Exon92702   97   III: 6551146-6551242 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7b.1 6546731 6551242 -1

1 Sequence

Length
3164

1 Sequence Ontology Term

Identifier Name Description
transcript