WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09E7.7c.1 Sequence Name  C09E7.7c.1
Length (nt)  2697   Chromosome Location  III: 6546910-6550826
Chromosome . Primary Identifier  III Chromosome Location . Start  6546910
Chromosome Location . End  6550826 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015641 C09E7.7 C09E7.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09E7.7c C09E7.7c 2697   III: 6546910-6547183

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7c.1 6546910 6550826 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92640   274   III: 6546910-6547183 Caenorhabditis elegans
Exon92644   213   III: 6547233-6547445 Caenorhabditis elegans
Exon92648   42   III: 6547490-6547531 Caenorhabditis elegans
Exon92652   102   III: 6547577-6547678 Caenorhabditis elegans
Exon92656   93   III: 6547726-6547818 Caenorhabditis elegans
Exon92660   63   III: 6547864-6547926 Caenorhabditis elegans
Exon92664   105   III: 6547970-6548074 Caenorhabditis elegans
Exon92668   415   III: 6548122-6548536 Caenorhabditis elegans
Exon92672   127   III: 6548580-6548706 Caenorhabditis elegans
Exon92676   309   III: 6548793-6549101 Caenorhabditis elegans
Exon92680   213   III: 6549149-6549361 Caenorhabditis elegans
Exon92684   204   III: 6549409-6549612 Caenorhabditis elegans
Exon92688   279   III: 6549867-6550145 Caenorhabditis elegans
Exon92692   150   III: 6550369-6550518 Caenorhabditis elegans
Exon92696   105   III: 6550565-6550669 Caenorhabditis elegans
Exon92700   3   III: 6550824-6550826 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09E7.7c.1 6546910 6550826 -1

1 Sequence

Length
2697

1 Sequence Ontology Term

Identifier Name Description
transcript