WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09E7.8b Sequence Name  C09E7.8b
Length (nt)  2430   Chromosome Location  III: 6553700-6553789
Chromosome . Primary Identifier  III Chromosome Location . Start  6553700
Chromosome Location . End  6553789
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09E7.8b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50020 C09E7.8, isoform b 93.4 809 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00040196
WBRNAi00040198

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09E7.8b 6553700 6553789 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015642 C09E7.8 C09E7.8 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09E7.8b 6553700 6553789 -1
CDS:C09E7.8b 6553838 6554375 -1
CDS:C09E7.8b 6554423 6554656 -1
CDS:C09E7.8b 6554702 6554743 -1
CDS:C09E7.8b 6554788 6554895 -1
CDS:C09E7.8b 6554942 6555034 -1
CDS:C09E7.8b 6555079 6555246 -1
CDS:C09E7.8b 6555299 6555689 -1
CDS:C09E7.8b 6555734 6555845 -1
CDS:C09E7.8b 6555893 6556210 -1
CDS:C09E7.8b 6556524 6556733 -1
CDS:C09E7.8b 6556781 6556906 -1

1 Sequence

Length
2430

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09E7.8b.1 C09E7.8b.1 2430   III: 6553700-6556906