WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27B3.2a.1 Sequence Name  F27B3.2a.1
Length (nt)  1981   Chromosome Location  III: 6581885-6586580
Chromosome . Primary Identifier  III Chromosome Location . Start  6581885
Chromosome Location . End  6586580 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27B3.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000060 acr-21 F27B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27B3.2a F27B3.2a 1908   III: 6581927-6581969

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2a.1 6581885 6586580 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92757   85   III: 6581885-6581969 Caenorhabditis elegans
Exon92759   167   III: 6583461-6583627 Caenorhabditis elegans
Exon92763   155   III: 6583926-6584080 Caenorhabditis elegans
Exon92767   212   III: 6584129-6584340 Caenorhabditis elegans
Exon92771   146   III: 6584387-6584532 Caenorhabditis elegans
Exon92775   243   III: 6584705-6584947 Caenorhabditis elegans
Exon92779   144   III: 6584995-6585138 Caenorhabditis elegans
Exon92783   118   III: 6585183-6585300 Caenorhabditis elegans
Exon92787   158   III: 6585343-6585500 Caenorhabditis elegans
Exon92791   66   III: 6585565-6585630 Caenorhabditis elegans
Exon92793   351   III: 6585942-6586292 Caenorhabditis elegans
Exon92800   136   III: 6586445-6586580 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2a.1 6581885 6586580 1

1 Sequence

Length
1981

1 Sequence Ontology Term

Identifier Name Description
transcript