WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27B3.2b.1 Sequence Name  F27B3.2b.1
Length (nt)  1842   Chromosome Location  III: 6581927-6586549
Chromosome . Primary Identifier  III Chromosome Location . Start  6581927
Chromosome Location . End  6586549 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27B3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000060 acr-21 F27B3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27B3.2b F27B3.2b 1842   III: 6581927-6581969

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2b.1 6581927 6586549 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92796   43   III: 6581927-6581969 Caenorhabditis elegans
Exon92798   167   III: 6583461-6583627 Caenorhabditis elegans
Exon92802   155   III: 6583926-6584080 Caenorhabditis elegans
Exon92806   212   III: 6584129-6584340 Caenorhabditis elegans
Exon92810   146   III: 6584387-6584532 Caenorhabditis elegans
Exon92814   243   III: 6584705-6584947 Caenorhabditis elegans
Exon92818   144   III: 6584995-6585138 Caenorhabditis elegans
Exon92822   118   III: 6585183-6585300 Caenorhabditis elegans
Exon92826   158   III: 6585343-6585500 Caenorhabditis elegans
Exon92832   351   III: 6585942-6586292 Caenorhabditis elegans
Exon92835   105   III: 6586445-6586549 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F27B3.2b.1 6581927 6586549 1

1 Sequence

Length
1842

1 Sequence Ontology Term

Identifier Name Description
transcript