WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F20H11.2.1 Sequence Name  F20H11.2.1
Length (nt)  6427   Chromosome Location  III: 6592525-6601173
Chromosome . Primary Identifier  III Chromosome Location . Start  6592525
Chromosome Location . End  6601173 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F20H11.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002889 let-765 F20H11.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F20H11.2 F20H11.2 5601   III: 6593265-6593353

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F20H11.2.1 6592525 6601173 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92825   829   III: 6592525-6593353 Caenorhabditis elegans
Exon92826   225   III: 6593577-6593801 Caenorhabditis elegans
Exon92827   235   III: 6593850-6594084 Caenorhabditis elegans
Exon92828   164   III: 6594129-6594292 Caenorhabditis elegans
Exon92829   219   III: 6594344-6594562 Caenorhabditis elegans
Exon92830   957   III: 6594613-6595569 Caenorhabditis elegans
Exon92831   865   III: 6595620-6596484 Caenorhabditis elegans
Exon92832   702   III: 6596566-6597267 Caenorhabditis elegans
Exon92833   327   III: 6597346-6597672 Caenorhabditis elegans
Exon92834   256   III: 6597737-6597992 Caenorhabditis elegans
Exon92835   460   III: 6598141-6598600 Caenorhabditis elegans
Exon92836   488   III: 6598726-6599213 Caenorhabditis elegans
Exon92837   257   III: 6599744-6600000 Caenorhabditis elegans
Exon92838   268   III: 6600568-6600835 Caenorhabditis elegans
Exon92839   175   III: 6600999-6601173 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F20H11.2.1 6592525 6601173 -1

1 Sequence

Length
6427

1 Sequence Ontology Term

Identifier Name Description
transcript