WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B9.3.1 Sequence Name  C13B9.3.1
Length (nt)  1808   Chromosome Location  III: 6622700-6624972
Chromosome . Primary Identifier  III Chromosome Location . Start  6622700
Chromosome Location . End  6624972 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015734 copd-1 C13B9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B9.3 C13B9.3 1548   III: 6622949-6623240

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.3.1 6622700 6624972 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92884   541   III: 6622700-6623240 Caenorhabditis elegans
Exon92886   109   III: 6623499-6623607 Caenorhabditis elegans
Exon92887   372   III: 6623674-6624045 Caenorhabditis elegans
Exon92889   633   III: 6624103-6624735 Caenorhabditis elegans
Exon92890   153   III: 6624820-6624972 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.3.1 6622700 6624972 -1

1 Sequence

Length
1808

1 Sequence Ontology Term

Identifier Name Description
transcript