WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13B9.4d.3 Sequence Name  C13B9.4d.3
Length (nt)  1776   Chromosome Location  III: 6633926-6638848
Chromosome . Primary Identifier  III Chromosome Location . Start  6633926
Chromosome Location . End  6638848 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13B9.4d.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015735 pdfr-1 C13B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13B9.4d C13B9.4d 1596   III: 6634082-6634165

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.4d.3 6633926 6638848 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon92913   240   III: 6633926-6634165 Caenorhabditis elegans
Exon92936   99   III: 6634304-6634402 Caenorhabditis elegans
Exon92949   138   III: 6634451-6634588 Caenorhabditis elegans
Exon92962   90   III: 6634740-6634829 Caenorhabditis elegans
Exon92975   323   III: 6634877-6635199 Caenorhabditis elegans
Exon92988   157   III: 6635246-6635402 Caenorhabditis elegans
Exon93001   157   III: 6635449-6635605 Caenorhabditis elegans
Exon93014   104   III: 6636012-6636115 Caenorhabditis elegans
Exon93027   125   III: 6636893-6637017 Caenorhabditis elegans
Exon93040   123   III: 6638070-6638192 Caenorhabditis elegans
Exon93053   46   III: 6638351-6638396 Caenorhabditis elegans
Exon93066   69   III: 6638492-6638560 Caenorhabditis elegans
Exon93080   105   III: 6638744-6638848 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13B9.4d.3 6633926 6638848 -1

1 Sequence

Length
1776

1 Sequence Ontology Term

Identifier Name Description
transcript