WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.7c.1 Sequence Name  F37A4.7c.1
Length (nt)  2889   Chromosome Location  III: 6691089-6703780
Chromosome . Primary Identifier  III Chromosome Location . Start  6691089
Chromosome Location . End  6703780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004316 rbf-1 F37A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.7c F37A4.7c 2889   III: 6691089-6691110

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7c.1 6691089 6703780 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93104   22   III: 6691089-6691110 Caenorhabditis elegans
Exon93111   82   III: 6696751-6696832 Caenorhabditis elegans
Exon93117   156   III: 6696910-6697065 Caenorhabditis elegans
Exon93123   136   III: 6697405-6697540 Caenorhabditis elegans
Exon93129   108   III: 6697985-6698092 Caenorhabditis elegans
Exon93135   329   III: 6698582-6698910 Caenorhabditis elegans
Exon93141   54   III: 6699077-6699130 Caenorhabditis elegans
Exon93147   90   III: 6699244-6699333 Caenorhabditis elegans
Exon93153   353   III: 6699585-6699937 Caenorhabditis elegans
Exon93159   171   III: 6700028-6700198 Caenorhabditis elegans
Exon93165   221   III: 6700247-6700467 Caenorhabditis elegans
Exon93171   70   III: 6700517-6700586 Caenorhabditis elegans
Exon93177   252   III: 6701099-6701350 Caenorhabditis elegans
Exon93183   262   III: 6702171-6702432 Caenorhabditis elegans
Exon93189   206   III: 6702507-6702712 Caenorhabditis elegans
Exon93195   164   III: 6702967-6703130 Caenorhabditis elegans
Exon93201   97   III: 6703182-6703278 Caenorhabditis elegans
Exon93204   116   III: 6703665-6703780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7c.1 6691089 6703780 1

1 Sequence

Length
2889

1 Sequence Ontology Term

Identifier Name Description
transcript