WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.7a.3 Sequence Name  F37A4.7a.3
Length (nt)  3401   Chromosome Location  III: 6695573-6703998
Chromosome . Primary Identifier  III Chromosome Location . Start  6695573
Chromosome Location . End  6703998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.7a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004316 rbf-1 F37A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.7a F37A4.7a 2862   III: 6696756-6696832

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F37A4.7a.3 6695573 6703998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93105   316   III: 6695573-6695888 Caenorhabditis elegans
Exon93109   82   III: 6696751-6696832 Caenorhabditis elegans
Exon93115   156   III: 6696910-6697065 Caenorhabditis elegans
Exon93121   136   III: 6697405-6697540 Caenorhabditis elegans
Exon93127   108   III: 6697985-6698092 Caenorhabditis elegans
Exon93133   329   III: 6698582-6698910 Caenorhabditis elegans
Exon93139   54   III: 6699077-6699130 Caenorhabditis elegans
Exon93145   90   III: 6699244-6699333 Caenorhabditis elegans
Exon93151   353   III: 6699585-6699937 Caenorhabditis elegans
Exon93157   171   III: 6700028-6700198 Caenorhabditis elegans
Exon93163   221   III: 6700247-6700467 Caenorhabditis elegans
Exon93169   70   III: 6700517-6700586 Caenorhabditis elegans
Exon93175   252   III: 6701099-6701350 Caenorhabditis elegans
Exon93181   262   III: 6702171-6702432 Caenorhabditis elegans
Exon93187   206   III: 6702507-6702712 Caenorhabditis elegans
Exon93193   164   III: 6702967-6703130 Caenorhabditis elegans
Exon93199   97   III: 6703182-6703278 Caenorhabditis elegans
Exon93208   334   III: 6703665-6703998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F37A4.7a.3 6695573 6703998 1

1 Sequence

Length
3401

1 Sequence Ontology Term

Identifier Name Description
transcript