WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.7d.1 Sequence Name  F37A4.7d.1
Length (nt)  3600   Chromosome Location  III: 6675760-6703780
Chromosome . Primary Identifier  III Chromosome Location . Start  6675760
Chromosome Location . End  6703780 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004316 rbf-1 F37A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.7d F37A4.7d 3372   III: 6675988-6676231

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7d.1 6675760 6703780 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93133   472   III: 6675760-6676231 Caenorhabditis elegans
Exon93137   210   III: 6679024-6679233 Caenorhabditis elegans
Exon93139   51   III: 6684533-6684583 Caenorhabditis elegans
Exon93150   82   III: 6696751-6696832 Caenorhabditis elegans
Exon93156   156   III: 6696910-6697065 Caenorhabditis elegans
Exon93162   136   III: 6697405-6697540 Caenorhabditis elegans
Exon93168   108   III: 6697985-6698092 Caenorhabditis elegans
Exon93174   329   III: 6698582-6698910 Caenorhabditis elegans
Exon93180   54   III: 6699077-6699130 Caenorhabditis elegans
Exon93186   90   III: 6699244-6699333 Caenorhabditis elegans
Exon93192   353   III: 6699585-6699937 Caenorhabditis elegans
Exon93198   171   III: 6700028-6700198 Caenorhabditis elegans
Exon93204   221   III: 6700247-6700467 Caenorhabditis elegans
Exon93210   70   III: 6700517-6700586 Caenorhabditis elegans
Exon93216   252   III: 6701099-6701350 Caenorhabditis elegans
Exon93222   262   III: 6702171-6702432 Caenorhabditis elegans
Exon93228   206   III: 6702507-6702712 Caenorhabditis elegans
Exon93234   164   III: 6702967-6703130 Caenorhabditis elegans
Exon93240   97   III: 6703182-6703278 Caenorhabditis elegans
Exon93243   116   III: 6703665-6703780 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7d.1 6675760 6703780 1

1 Sequence

Length
3600

1 Sequence Ontology Term

Identifier Name Description
transcript