WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.7a.2 Sequence Name  F37A4.7a.2
Length (nt)  3781   Chromosome Location  III: 6675797-6703998
Chromosome . Primary Identifier  III Chromosome Location . Start  6675797
Chromosome Location . End  6703998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004316 rbf-1 F37A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.7a F37A4.7a 2862   III: 6696756-6696832

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7a.2 6675797 6703998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93134   435   III: 6675797-6676231 Caenorhabditis elegans
Exon93136   210   III: 6679024-6679233 Caenorhabditis elegans
Exon93138   51   III: 6684533-6684583 Caenorhabditis elegans
Exon93146   82   III: 6696751-6696832 Caenorhabditis elegans
Exon93152   156   III: 6696910-6697065 Caenorhabditis elegans
Exon93158   136   III: 6697405-6697540 Caenorhabditis elegans
Exon93164   108   III: 6697985-6698092 Caenorhabditis elegans
Exon93170   329   III: 6698582-6698910 Caenorhabditis elegans
Exon93176   54   III: 6699077-6699130 Caenorhabditis elegans
Exon93182   90   III: 6699244-6699333 Caenorhabditis elegans
Exon93188   353   III: 6699585-6699937 Caenorhabditis elegans
Exon93194   171   III: 6700028-6700198 Caenorhabditis elegans
Exon93200   221   III: 6700247-6700467 Caenorhabditis elegans
Exon93206   70   III: 6700517-6700586 Caenorhabditis elegans
Exon93212   252   III: 6701099-6701350 Caenorhabditis elegans
Exon93218   262   III: 6702171-6702432 Caenorhabditis elegans
Exon93224   206   III: 6702507-6702712 Caenorhabditis elegans
Exon93230   164   III: 6702967-6703130 Caenorhabditis elegans
Exon93236   97   III: 6703182-6703278 Caenorhabditis elegans
Exon93245   334   III: 6703665-6703998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7a.2 6675797 6703998 1

1 Sequence

Length
3781

1 Sequence Ontology Term

Identifier Name Description
transcript