WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.7a.3 Sequence Name  F37A4.7a.3
Length (nt)  3401   Chromosome Location  III: 6695573-6703998
Chromosome . Primary Identifier  III Chromosome Location . Start  6695573
Chromosome Location . End  6703998 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.7a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004316 rbf-1 F37A4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.7a F37A4.7a 2862   III: 6696756-6696832

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7a.3 6695573 6703998 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93143   316   III: 6695573-6695888 Caenorhabditis elegans
Exon93147   82   III: 6696751-6696832 Caenorhabditis elegans
Exon93153   156   III: 6696910-6697065 Caenorhabditis elegans
Exon93159   136   III: 6697405-6697540 Caenorhabditis elegans
Exon93165   108   III: 6697985-6698092 Caenorhabditis elegans
Exon93171   329   III: 6698582-6698910 Caenorhabditis elegans
Exon93177   54   III: 6699077-6699130 Caenorhabditis elegans
Exon93183   90   III: 6699244-6699333 Caenorhabditis elegans
Exon93189   353   III: 6699585-6699937 Caenorhabditis elegans
Exon93195   171   III: 6700028-6700198 Caenorhabditis elegans
Exon93201   221   III: 6700247-6700467 Caenorhabditis elegans
Exon93207   70   III: 6700517-6700586 Caenorhabditis elegans
Exon93213   252   III: 6701099-6701350 Caenorhabditis elegans
Exon93219   262   III: 6702171-6702432 Caenorhabditis elegans
Exon93225   206   III: 6702507-6702712 Caenorhabditis elegans
Exon93231   164   III: 6702967-6703130 Caenorhabditis elegans
Exon93237   97   III: 6703182-6703278 Caenorhabditis elegans
Exon93246   334   III: 6703665-6703998 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.7a.3 6695573 6703998 1

1 Sequence

Length
3401

1 Sequence Ontology Term

Identifier Name Description
transcript