WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.4.1 Sequence Name  F37A4.4.1
Length (nt)  3621   Chromosome Location  III: 6713566-6718025
Chromosome . Primary Identifier  III Chromosome Location . Start  6713566
Chromosome Location . End  6718025 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018134 F37A4.4 F37A4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.4 F37A4.4 3492   III: 6713705-6713777

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.4.1 6713566 6718025 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93229   35   III: 6713566-6713600 Caenorhabditis elegans
Exon93230   127   III: 6713651-6713777 Caenorhabditis elegans
Exon93231   2194   III: 6713862-6716055 Caenorhabditis elegans
Exon93232   181   III: 6716397-6716577 Caenorhabditis elegans
Exon93233   115   III: 6716633-6716747 Caenorhabditis elegans
Exon93234   225   III: 6716797-6717021 Caenorhabditis elegans
Exon93235   101   III: 6717147-6717247 Caenorhabditis elegans
Exon93236   316   III: 6717291-6717606 Caenorhabditis elegans
Exon93237   140   III: 6717652-6717791 Caenorhabditis elegans
Exon93238   187   III: 6717839-6718025 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.4.1 6713566 6718025 1

1 Sequence

Length
3621

1 Sequence Ontology Term

Identifier Name Description
transcript