WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F37A4.8.1 Sequence Name  F37A4.8.1
Length (nt)  3358   Chromosome Location  III: 6703988-6710100
Chromosome . Primary Identifier  III Chromosome Location . Start  6703988
Chromosome Location . End  6710100 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F37A4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002169 isw-1 F37A4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F37A4.8 F37A4.8 3030   III: 6704216-6704392

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.8.1 6703988 6710100 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93247   405   III: 6703988-6704392 Caenorhabditis elegans
Exon93248   417   III: 6704440-6704856 Caenorhabditis elegans
Exon93249   174   III: 6704909-6705082 Caenorhabditis elegans
Exon93255   171   III: 6707355-6707525 Caenorhabditis elegans
Exon93256   1077   III: 6707573-6708649 Caenorhabditis elegans
Exon93257   357   III: 6708702-6709058 Caenorhabditis elegans
Exon93258   180   III: 6709108-6709287 Caenorhabditis elegans
Exon93259   79   III: 6709336-6709414 Caenorhabditis elegans
Exon93260   190   III: 6709459-6709648 Caenorhabditis elegans
Exon93261   139   III: 6709698-6709836 Caenorhabditis elegans
Exon93262   169   III: 6709932-6710100 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F37A4.8.1 6703988 6710100 -1

1 Sequence

Length
3358

1 Sequence Ontology Term

Identifier Name Description
transcript