WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102E9.2a.1 Sequence Name  Y102E9.2a.1
Length (nt)  1441   Chromosome Location  III: 6725789-6728059
Chromosome . Primary Identifier  III Chromosome Location . Start  6725789
Chromosome Location . End  6728059 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102E9.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022420 wdr-4 Y102E9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102E9.2a Y102E9.2a 1167   III: 6725795-6725887

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.2a.1 6725789 6728059 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93276   99   III: 6725789-6725887 Caenorhabditis elegans
Exon93277   93   III: 6725932-6726024 Caenorhabditis elegans
Exon93279   372   III: 6726075-6726446 Caenorhabditis elegans
Exon93282   88   III: 6726495-6726582 Caenorhabditis elegans
Exon93283   119   III: 6726627-6726745 Caenorhabditis elegans
Exon93285   149   III: 6726793-6726941 Caenorhabditis elegans
Exon93288   157   III: 6727461-6727617 Caenorhabditis elegans
Exon93291   364   III: 6727696-6728059 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.2a.1 6725789 6728059 1

1 Sequence

Length
1441

1 Sequence Ontology Term

Identifier Name Description
transcript