WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102E9.1a.4 Sequence Name  Y102E9.1a.4
Length (nt)  1659   Chromosome Location  III: 6730809-6733936
Chromosome . Primary Identifier  III Chromosome Location . Start  6730809
Chromosome Location . End  6733936 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102E9.1a.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003851 odr-4 Y102E9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102E9.1a Y102E9.1a 1338   III: 6732174-6732359

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.1a.4 6730809 6733936 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93304   121   III: 6730809-6730929 Caenorhabditis elegans
Exon93305   99   III: 6731220-6731318 Caenorhabditis elegans
Exon93309   197   III: 6732163-6732359 Caenorhabditis elegans
Exon93317   231   III: 6732409-6732639 Caenorhabditis elegans
Exon93323   352   III: 6732779-6733130 Caenorhabditis elegans
Exon93329   165   III: 6733179-6733343 Caenorhabditis elegans
Exon93335   204   III: 6733397-6733600 Caenorhabditis elegans
Exon93342   290   III: 6733647-6733936 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.1a.4 6730809 6733936 1

1 Sequence

Length
1659

1 Sequence Ontology Term

Identifier Name Description
transcript