WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y102E9.1c.1 Sequence Name  Y102E9.1c.1
Length (nt)  1422   Chromosome Location  III: 6731234-6733846
Chromosome . Primary Identifier  III Chromosome Location . Start  6731234
Chromosome Location . End  6733846 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y102E9.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003851 odr-4 Y102E9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y102E9.1c Y102E9.1c 1422   III: 6731234-6731318

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.1c.1 6731234 6733846 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93306   85   III: 6731234-6731318 Caenorhabditis elegans
Exon93312   191   III: 6732169-6732359 Caenorhabditis elegans
Exon93319   231   III: 6732409-6732639 Caenorhabditis elegans
Exon93325   352   III: 6732779-6733130 Caenorhabditis elegans
Exon93331   159   III: 6733185-6733343 Caenorhabditis elegans
Exon93337   204   III: 6733397-6733600 Caenorhabditis elegans
Exon93338   200   III: 6733647-6733846 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y102E9.1c.1 6731234 6733846 1

1 Sequence

Length
1422

1 Sequence Ontology Term

Identifier Name Description
transcript