WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07E12.1.1 Sequence Name  K07E12.1.1
Length (nt)  39690   Chromosome Location  III: 6746308-6794764
Chromosome . Primary Identifier  III Chromosome Location . Start  6746308
Chromosome Location . End  6794764 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07E12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000998 dig-1 K07E12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07E12.1 K07E12.1 39255   III: 6746478-6746552

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07E12.1.1 6746308 6794764 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

48 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93355   99   III: 6746308-6746406 Caenorhabditis elegans
Exon93356   100   III: 6746453-6746552 Caenorhabditis elegans
Exon93357   100   III: 6747090-6747189 Caenorhabditis elegans
Exon93359   99   III: 6748760-6748858 Caenorhabditis elegans
Exon93360   53   III: 6749223-6749275 Caenorhabditis elegans
Exon93361   116   III: 6749366-6749481 Caenorhabditis elegans
Exon93362   347   III: 6749526-6749872 Caenorhabditis elegans
Exon93363   232   III: 6749921-6750152 Caenorhabditis elegans
Exon93364   576   III: 6750203-6750778 Caenorhabditis elegans
Exon93365   1040   III: 6750827-6751866 Caenorhabditis elegans
Exon93366   330   III: 6751914-6752243 Caenorhabditis elegans
Exon93367   101   III: 6752292-6752392 Caenorhabditis elegans
Exon93368   913   III: 6752439-6753351 Caenorhabditis elegans
Exon93369   171   III: 6753401-6753571 Caenorhabditis elegans
Exon93370   470   III: 6753622-6754091 Caenorhabditis elegans
Exon93371   1393   III: 6754145-6755537 Caenorhabditis elegans
Exon93372   2010   III: 6755581-6757590 Caenorhabditis elegans
Exon93373   197   III: 6757747-6757943 Caenorhabditis elegans
Exon93374   435   III: 6758464-6758898 Caenorhabditis elegans
Exon93375   2154   III: 6758950-6761103 Caenorhabditis elegans
Exon93376   852   III: 6761218-6762069 Caenorhabditis elegans
Exon93378   1125   III: 6762462-6763586 Caenorhabditis elegans
Exon93381   435   III: 6763828-6764262 Caenorhabditis elegans
Exon93382   1319   III: 6764351-6765669 Caenorhabditis elegans
Exon93383   137   III: 6765716-6765852 Caenorhabditis elegans
Exon93384   767   III: 6765907-6766673 Caenorhabditis elegans
Exon93385   1242   III: 6766739-6767980 Caenorhabditis elegans
Exon93386   1089   III: 6768082-6769170 Caenorhabditis elegans
Exon93387   199   III: 6769472-6769670 Caenorhabditis elegans
Exon93388   152   III: 6769719-6769870 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07E12.1.1 6746308 6794764 1

1 Sequence

Length
39690

1 Sequence Ontology Term

Identifier Name Description
transcript