WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.4f.1 Sequence Name  R13F6.4f.1
Length (nt)  8292   Chromosome Location  III: 6823330-6846783
Chromosome . Primary Identifier  III Chromosome Location . Start  6823330
Chromosome Location . End  6846783 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006498 ten-1 R13F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.4f R13F6.4f 8292   III: 6823330-6823501

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4f.1 6823330 6846783 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93495   172   III: 6823330-6823501 Caenorhabditis elegans
Exon93504   79   III: 6830392-6830470 Caenorhabditis elegans
Exon93509   140   III: 6830516-6830655 Caenorhabditis elegans
Exon93513   92   III: 6831182-6831273 Caenorhabditis elegans
Exon93517   127   III: 6831322-6831448 Caenorhabditis elegans
Exon93524   55   III: 6834242-6834296 Caenorhabditis elegans
Exon93534   99   III: 6838363-6838461 Caenorhabditis elegans
Exon93539   182   III: 6838525-6838706 Caenorhabditis elegans
Exon93544   172   III: 6838798-6838969 Caenorhabditis elegans
Exon93549   1271   III: 6839021-6840291 Caenorhabditis elegans
Exon93554   1245   III: 6840344-6841588 Caenorhabditis elegans
Exon93559   516   III: 6841636-6842151 Caenorhabditis elegans
Exon93564   1100   III: 6842204-6843303 Caenorhabditis elegans
Exon93569   357   III: 6843367-6843723 Caenorhabditis elegans
Exon93574   1921   III: 6843970-6845890 Caenorhabditis elegans
Exon93580   652   III: 6845939-6846590 Caenorhabditis elegans
Exon93584   112   III: 6846672-6846783 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4f.1 6823330 6846783 1

1 Sequence

Length
8292

1 Sequence Ontology Term

Identifier Name Description
transcript