WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.4a.2 Sequence Name  R13F6.4a.2
Length (nt)  8740   Chromosome Location  III: 6830386-6847397
Chromosome . Primary Identifier  III Chromosome Location . Start  6830386
Chromosome Location . End  6847397 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006498 ten-1 R13F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.4a R13F6.4a 7509   III: 6838544-6838706

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4a.2 6830386 6847397 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93502   85   III: 6830386-6830470 Caenorhabditis elegans
Exon93506   140   III: 6830516-6830655 Caenorhabditis elegans
Exon93510   92   III: 6831182-6831273 Caenorhabditis elegans
Exon93514   127   III: 6831322-6831448 Caenorhabditis elegans
Exon93521   55   III: 6834242-6834296 Caenorhabditis elegans
Exon93531   99   III: 6838363-6838461 Caenorhabditis elegans
Exon93536   182   III: 6838525-6838706 Caenorhabditis elegans
Exon93541   172   III: 6838798-6838969 Caenorhabditis elegans
Exon93546   1271   III: 6839021-6840291 Caenorhabditis elegans
Exon93551   1245   III: 6840344-6841588 Caenorhabditis elegans
Exon93556   516   III: 6841636-6842151 Caenorhabditis elegans
Exon93561   1100   III: 6842204-6843303 Caenorhabditis elegans
Exon93566   357   III: 6843367-6843723 Caenorhabditis elegans
Exon93571   1921   III: 6843970-6845890 Caenorhabditis elegans
Exon93577   652   III: 6845939-6846590 Caenorhabditis elegans
Exon93586   726   III: 6846672-6847397 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4a.2 6830386 6847397 1

1 Sequence

Length
8740

1 Sequence Ontology Term

Identifier Name Description
transcript