WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.4a.1 Sequence Name  R13F6.4a.1
Length (nt)  8446   Chromosome Location  III: 6833834-6847283
Chromosome . Primary Identifier  III Chromosome Location . Start  6833834
Chromosome Location . End  6847283 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006498 ten-1 R13F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.4a R13F6.4a 7509   III: 6838544-6838706

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4a.1 6833834 6847283 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93519   264   III: 6833834-6834097 Caenorhabditis elegans
Exon93520   55   III: 6834242-6834296 Caenorhabditis elegans
Exon93530   99   III: 6838363-6838461 Caenorhabditis elegans
Exon93535   182   III: 6838525-6838706 Caenorhabditis elegans
Exon93540   172   III: 6838798-6838969 Caenorhabditis elegans
Exon93545   1271   III: 6839021-6840291 Caenorhabditis elegans
Exon93550   1245   III: 6840344-6841588 Caenorhabditis elegans
Exon93555   516   III: 6841636-6842151 Caenorhabditis elegans
Exon93560   1100   III: 6842204-6843303 Caenorhabditis elegans
Exon93565   357   III: 6843367-6843723 Caenorhabditis elegans
Exon93570   1921   III: 6843970-6845890 Caenorhabditis elegans
Exon93576   652   III: 6845939-6846590 Caenorhabditis elegans
Exon93585   612   III: 6846672-6847283 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.4a.1 6833834 6847283 1

1 Sequence

Length
8446

1 Sequence Ontology Term

Identifier Name Description
transcript