WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.6b.2 Sequence Name  R13F6.6b.2
Length (nt)  2464   Chromosome Location  III: 6853138-6856808
Chromosome . Primary Identifier  III Chromosome Location . Start  6853138
Chromosome Location . End  6856808 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.6b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006971 zak-1 R13F6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.6b R13F6.6b 1269   III: 6853300-6853419

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.6b.2 6853138 6856808 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93609   282   III: 6853138-6853419 Caenorhabditis elegans
Exon93614   207   III: 6853468-6853674 Caenorhabditis elegans
Exon93619   186   III: 6853924-6854109 Caenorhabditis elegans
Exon93624   129   III: 6854157-6854285 Caenorhabditis elegans
Exon93629   222   III: 6854330-6854551 Caenorhabditis elegans
Exon93634   227   III: 6854611-6854837 Caenorhabditis elegans
Exon93638   181   III: 6854894-6855074 Caenorhabditis elegans
Exon93644   218   III: 6855163-6855380 Caenorhabditis elegans
Exon93651   192   III: 6855625-6855816 Caenorhabditis elegans
Exon93656   185   III: 6855873-6856057 Caenorhabditis elegans
Exon93658   435   III: 6856374-6856808 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.6b.2 6853138 6856808 -1

1 Sequence

Length
2464

1 Sequence Ontology Term

Identifier Name Description
transcript