WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.9.1 Sequence Name  R13F6.9.1
Length (nt)  1304   Chromosome Location  III: 6860974-6863968
Chromosome . Primary Identifier  III Chromosome Location . Start  6860974
Chromosome Location . End  6863968 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004857 sma-3 R13F6.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.9 R13F6.9 1182   III: 6861091-6861156

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.9.1 6860974 6863968 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93671   183   III: 6860974-6861156 Caenorhabditis elegans
Exon93672   81   III: 6861473-6861553 Caenorhabditis elegans
Exon93673   81   III: 6861646-6861726 Caenorhabditis elegans
Exon93674   253   III: 6861789-6862041 Caenorhabditis elegans
Exon93675   59   III: 6862364-6862422 Caenorhabditis elegans
Exon93676   96   III: 6862467-6862562 Caenorhabditis elegans
Exon93677   86   III: 6862610-6862695 Caenorhabditis elegans
Exon93678   65   III: 6862813-6862877 Caenorhabditis elegans
Exon93679   89   III: 6862936-6863024 Caenorhabditis elegans
Exon93680   75   III: 6863074-6863148 Caenorhabditis elegans
Exon93681   92   III: 6863275-6863366 Caenorhabditis elegans
Exon93682   144   III: 6863825-6863968 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.9.1 6860974 6863968 -1

1 Sequence

Length
1304

1 Sequence Ontology Term

Identifier Name Description
transcript