WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R13F6.10.1 Sequence Name  R13F6.10.1
Length (nt)  3263   Chromosome Location  III: 6865206-6869460
Chromosome . Primary Identifier  III Chromosome Location . Start  6865206
Chromosome Location . End  6869460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R13F6.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020068 cra-1 R13F6.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R13F6.10 R13F6.10 2877   III: 6865514-6865621

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.10.1 6865206 6869460 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93683   416   III: 6865206-6865621 Caenorhabditis elegans
Exon93684   171   III: 6865695-6865865 Caenorhabditis elegans
Exon93685   230   III: 6865906-6866135 Caenorhabditis elegans
Exon93686   355   III: 6866180-6866534 Caenorhabditis elegans
Exon93687   110   III: 6866583-6866692 Caenorhabditis elegans
Exon93688   118   III: 6866751-6866868 Caenorhabditis elegans
Exon93689   96   III: 6866914-6867009 Caenorhabditis elegans
Exon93690   170   III: 6867065-6867234 Caenorhabditis elegans
Exon93691   111   III: 6867283-6867393 Caenorhabditis elegans
Exon93692   79   III: 6867442-6867520 Caenorhabditis elegans
Exon93693   123   III: 6867574-6867696 Caenorhabditis elegans
Exon93694   99   III: 6867748-6867846 Caenorhabditis elegans
Exon93695   241   III: 6867894-6868134 Caenorhabditis elegans
Exon93696   96   III: 6868185-6868280 Caenorhabditis elegans
Exon93697   299   III: 6868362-6868660 Caenorhabditis elegans
Exon93698   97   III: 6868712-6868808 Caenorhabditis elegans
Exon93699   107   III: 6868862-6868968 Caenorhabditis elegans
Exon93700   129   III: 6869016-6869144 Caenorhabditis elegans
Exon93701   86   III: 6869192-6869277 Caenorhabditis elegans
Exon93702   130   III: 6869331-6869460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R13F6.10.1 6865206 6869460 -1

1 Sequence

Length
3263

1 Sequence Ontology Term

Identifier Name Description
transcript