WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07E3.4a.1 Sequence Name  T07E3.4a.1
Length (nt)  1509   Chromosome Location  III: 6898016-6900605
Chromosome . Primary Identifier  III Chromosome Location . Start  6898016
Chromosome Location . End  6900605 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07E3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020315 T07E3.4 T07E3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07E3.4a T07E3.4a 1284   III: 6898040-6898116

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07E3.4a.1 6898016 6900605 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93774   101   III: 6898016-6898116 Caenorhabditis elegans
Exon93775   178   III: 6898166-6898343 Caenorhabditis elegans
Exon93777   138   III: 6898886-6899023 Caenorhabditis elegans
Exon93780   174   III: 6899074-6899247 Caenorhabditis elegans
Exon93783   490   III: 6899300-6899789 Caenorhabditis elegans
Exon93788   428   III: 6900178-6900605 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07E3.4a.1 6898016 6900605 1

1 Sequence

Length
1509

1 Sequence Ontology Term

Identifier Name Description
transcript