WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T07E3.6a.1 Sequence Name  T07E3.6a.1
Length (nt)  783   Chromosome Location  III: 6909590-6912265
Chromosome . Primary Identifier  III Chromosome Location . Start  6909590
Chromosome Location . End  6912265 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T07E3.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020317 pdf-1 T07E3.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T07E3.6a T07E3.6a 267   III: 6910087-6910159

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T07E3.6a.1 6909590 6912265 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93808   449   III: 6909590-6910038 Caenorhabditis elegans
Exon93811   74   III: 6910086-6910159 Caenorhabditis elegans
Exon93814   104   III: 6910963-6911066 Caenorhabditis elegans
Exon93816   156   III: 6912110-6912265 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T07E3.6a.1 6909590 6912265 -1

1 Sequence

Length
783

1 Sequence Ontology Term

Identifier Name Description
transcript