WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B9.7a.1 Sequence Name  F57B9.7a.1
Length (nt)  1483   Chromosome Location  III: 6923971-6928825
Chromosome . Primary Identifier  III Chromosome Location . Start  6923971
Chromosome Location . End  6928825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B9.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018998 flap-1 F57B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B9.7a F57B9.7a 1062   III: 6924377-6924481

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.7a.1 6923971 6928825 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93820   511   III: 6923971-6924481 Caenorhabditis elegans
Exon93822   105   III: 6924646-6924750 Caenorhabditis elegans
Exon93824   80   III: 6924800-6924879 Caenorhabditis elegans
Exon93826   227   III: 6925356-6925582 Caenorhabditis elegans
Exon93828   77   III: 6927159-6927235 Caenorhabditis elegans
Exon93830   174   III: 6927410-6927583 Caenorhabditis elegans
Exon93832   90   III: 6927627-6927716 Caenorhabditis elegans
Exon93835   117   III: 6928560-6928676 Caenorhabditis elegans
Exon93838   102   III: 6928724-6928825 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.7a.1 6923971 6928825 -1

1 Sequence

Length
1483

1 Sequence Ontology Term

Identifier Name Description
transcript