WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B9.7b.1 Sequence Name  F57B9.7b.1
Length (nt)  1404   Chromosome Location  III: 6924100-6928815
Chromosome . Primary Identifier  III Chromosome Location . Start  6924100
Chromosome Location . End  6928815 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B9.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018998 flap-1 F57B9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B9.7b F57B9.7b 1122   III: 6924377-6924481

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.7b.1 6924100 6928815 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93821   382   III: 6924100-6924481 Caenorhabditis elegans
Exon93823   105   III: 6924646-6924750 Caenorhabditis elegans
Exon93825   80   III: 6924800-6924879 Caenorhabditis elegans
Exon93827   227   III: 6925356-6925582 Caenorhabditis elegans
Exon93829   77   III: 6927159-6927235 Caenorhabditis elegans
Exon93831   174   III: 6927410-6927583 Caenorhabditis elegans
Exon93833   90   III: 6927627-6927716 Caenorhabditis elegans
Exon93834   60   III: 6927766-6927825 Caenorhabditis elegans
Exon93836   117   III: 6928560-6928676 Caenorhabditis elegans
Exon93837   92   III: 6928724-6928815 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.7b.1 6924100 6928815 -1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
transcript