WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57B9.9.1 Sequence Name  F57B9.9.1
Length (nt)  1843   Chromosome Location  III: 6941888-6945898
Chromosome . Primary Identifier  III Chromosome Location . Start  6941888
Chromosome Location . End  6945898 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57B9.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004133 abu-13 F57B9.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57B9.9 F57B9.9 1482   III: 6941998-6942220

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.9.1 6941888 6945898 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon93885   333   III: 6941888-6942220 Caenorhabditis elegans
Exon93886   193   III: 6942325-6942517 Caenorhabditis elegans
Exon93887   55   III: 6942567-6942621 Caenorhabditis elegans
Exon93888   129   III: 6942896-6943024 Caenorhabditis elegans
Exon93889   351   III: 6943073-6943423 Caenorhabditis elegans
Exon93891   136   III: 6944577-6944712 Caenorhabditis elegans
Exon93892   646   III: 6945253-6945898 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57B9.9.1 6941888 6945898 -1

1 Sequence

Length
1843

1 Sequence Ontology Term

Identifier Name Description
transcript