WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F31E3.3.1 Sequence Name  F31E3.3.1
Length (nt)  1114   Chromosome Location  III: 6972253-6973717
Chromosome . Primary Identifier  III Chromosome Location . Start  6972253
Chromosome Location . End  6973717 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F31E3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004340 rfc-4 F31E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F31E3.3 F31E3.3 1005   III: 6972260-6972321

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F31E3.3.1 6972253 6973717 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94014   69   III: 6972253-6972321 Caenorhabditis elegans
Exon94015   79   III: 6972368-6972446 Caenorhabditis elegans
Exon94016   95   III: 6972492-6972586 Caenorhabditis elegans
Exon94017   61   III: 6972635-6972695 Caenorhabditis elegans
Exon94018   257   III: 6972761-6973017 Caenorhabditis elegans
Exon94019   133   III: 6973065-6973197 Caenorhabditis elegans
Exon94020   231   III: 6973251-6973481 Caenorhabditis elegans
Exon94021   189   III: 6973529-6973717 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F31E3.3.1 6972253 6973717 1

1 Sequence

Length
1114

1 Sequence Ontology Term

Identifier Name Description
transcript