WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E8.3d.1 Sequence Name  C06E8.3d.1
Length (nt)  2087   Chromosome Location  III: 6990168-7002304
Chromosome . Primary Identifier  III Chromosome Location . Start  6990168
Chromosome Location . End  7002304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E8.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004182 prk-1 C06E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E8.3d C06E8.3d 1770   III: 6990356-6990423

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E8.3d.1 6990168 7002304 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94059   256   III: 6990168-6990423 Caenorhabditis elegans
Exon94062   71   III: 6996481-6996551 Caenorhabditis elegans
Exon94069   158   III: 6996598-6996755 Caenorhabditis elegans
Exon94073   92   III: 6996803-6996894 Caenorhabditis elegans
Exon94077   115   III: 6996943-6997057 Caenorhabditis elegans
Exon94080   160   III: 6997105-6997264 Caenorhabditis elegans
Exon94085   324   III: 6997315-6997638 Caenorhabditis elegans
Exon94088   204   III: 6997693-6997896 Caenorhabditis elegans
Exon94091   160   III: 7001496-7001655 Caenorhabditis elegans
Exon94093   139   III: 7001710-7001848 Caenorhabditis elegans
Exon94095   408   III: 7001897-7002304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E8.3d.1 6990168 7002304 1

1 Sequence

Length
2087

1 Sequence Ontology Term

Identifier Name Description
transcript