WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06E8.3c.1 Sequence Name  C06E8.3c.1
Length (nt)  1527   Chromosome Location  III: 6996482-7002300
Chromosome . Primary Identifier  III Chromosome Location . Start  6996482
Chromosome Location . End  7002300 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06E8.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004182 prk-1 C06E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06E8.3c C06E8.3c 1137   III: 6996482-6996551

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06E8.3c.1 6996482 7002300 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94064   70   III: 6996482-6996551 Caenorhabditis elegans
Exon94068   158   III: 6996598-6996755 Caenorhabditis elegans
Exon94072   92   III: 6996803-6996894 Caenorhabditis elegans
Exon94076   115   III: 6996943-6997057 Caenorhabditis elegans
Exon94079   160   III: 6997105-6997264 Caenorhabditis elegans
Exon94084   324   III: 6997315-6997638 Caenorhabditis elegans
Exon94087   204   III: 6997693-6997896 Caenorhabditis elegans
Exon94094   404   III: 7001897-7002300 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06E8.3c.1 6996482 7002300 1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
transcript