WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.2b.1 Sequence Name  F11H8.2b.1
Length (nt)  1700   Chromosome Location  III: 7009162-7019584
Chromosome . Primary Identifier  III Chromosome Location . Start  7009162
Chromosome Location . End  7019584 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017389 lgc-38 F11H8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.2b F11H8.2b 1440   III: 7009241-7009300

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2b.1 7009162 7019584 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94145   139   III: 7009162-7009300 Caenorhabditis elegans
Exon94147   62   III: 7009585-7009646 Caenorhabditis elegans
Exon94150   95   III: 7014309-7014403 Caenorhabditis elegans
Exon94152   68   III: 7015076-7015143 Caenorhabditis elegans
Exon94154   264   III: 7015195-7015458 Caenorhabditis elegans
Exon94156   39   III: 7015865-7015903 Caenorhabditis elegans
Exon94158   204   III: 7016097-7016300 Caenorhabditis elegans
Exon94160   88   III: 7016475-7016562 Caenorhabditis elegans
Exon94162   114   III: 7016610-7016723 Caenorhabditis elegans
Exon94164   96   III: 7016778-7016873 Caenorhabditis elegans
Exon94165   57   III: 7016938-7016994 Caenorhabditis elegans
Exon94167   68   III: 7017357-7017424 Caenorhabditis elegans
Exon94169   141   III: 7019088-7019228 Caenorhabditis elegans
Exon94171   265   III: 7019320-7019584 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.2b.1 7009162 7019584 1

1 Sequence

Length
1700

1 Sequence Ontology Term

Identifier Name Description
transcript