WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.1.2 Sequence Name  F11H8.1.2
Length (nt)  1618   Chromosome Location  III: 7021206-7023652
Chromosome . Primary Identifier  III Chromosome Location . Start  7021206
Chromosome Location . End  7023652 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004341 rfl-1 F11H8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.1 F11H8.1 1293   III: 7021890-7022072

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.1.2 7021206 7023652 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94139   234   III: 7021206-7021439 Caenorhabditis elegans
Exon94140   188   III: 7021885-7022072 Caenorhabditis elegans
Exon94143   83   III: 7022118-7022200 Caenorhabditis elegans
Exon94145   81   III: 7022250-7022330 Caenorhabditis elegans
Exon94147   109   III: 7022400-7022508 Caenorhabditis elegans
Exon94149   262   III: 7022557-7022818 Caenorhabditis elegans
Exon94151   202   III: 7022906-7023107 Caenorhabditis elegans
Exon94153   177   III: 7023151-7023327 Caenorhabditis elegans
Exon94155   282   III: 7023371-7023652 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.1.2 7021206 7023652 1

1 Sequence

Length
1618

1 Sequence Ontology Term

Identifier Name Description
transcript