WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.4b.1 Sequence Name  F11H8.4b.1
Length (nt)  4519   Chromosome Location  III: 7023642-7029205
Chromosome . Primary Identifier  III Chromosome Location . Start  7023642
Chromosome Location . End  7029205 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.4b F11H8.4b 4314   III: 7023838-7024005

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4b.1 7023642 7029205 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94156   364   III: 7023642-7024005 Caenorhabditis elegans
Exon94158   422   III: 7024051-7024472 Caenorhabditis elegans
Exon94161   506   III: 7024518-7025023 Caenorhabditis elegans
Exon94163   535   III: 7025071-7025605 Caenorhabditis elegans
Exon94165   652   III: 7025652-7026303 Caenorhabditis elegans
Exon94167   137   III: 7026354-7026490 Caenorhabditis elegans
Exon94169   361   III: 7026538-7026898 Caenorhabditis elegans
Exon94171   283   III: 7026948-7027230 Caenorhabditis elegans
Exon94173   200   III: 7027280-7027479 Caenorhabditis elegans
Exon94175   177   III: 7027527-7027703 Caenorhabditis elegans
Exon94177   237   III: 7027757-7027993 Caenorhabditis elegans
Exon94179   62   III: 7028041-7028102 Caenorhabditis elegans
Exon94181   94   III: 7028487-7028580 Caenorhabditis elegans
Exon94183   489   III: 7028717-7029205 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4b.1 7023642 7029205 -1

1 Sequence

Length
4519

1 Sequence Ontology Term

Identifier Name Description
transcript