WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.4a.1 Sequence Name  F11H8.4a.1
Length (nt)  4511   Chromosome Location  III: 7023642-7029203
Chromosome . Primary Identifier  III Chromosome Location . Start  7023642
Chromosome Location . End  7029203 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.4a F11H8.4a 4308   III: 7023838-7024005

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4a.1 7023642 7029203 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94194   364   III: 7023642-7024005 Caenorhabditis elegans
Exon94197   416   III: 7024057-7024472 Caenorhabditis elegans
Exon94198   506   III: 7024518-7025023 Caenorhabditis elegans
Exon94200   535   III: 7025071-7025605 Caenorhabditis elegans
Exon94202   652   III: 7025652-7026303 Caenorhabditis elegans
Exon94204   137   III: 7026354-7026490 Caenorhabditis elegans
Exon94206   361   III: 7026538-7026898 Caenorhabditis elegans
Exon94208   283   III: 7026948-7027230 Caenorhabditis elegans
Exon94210   200   III: 7027280-7027479 Caenorhabditis elegans
Exon94212   177   III: 7027527-7027703 Caenorhabditis elegans
Exon94214   237   III: 7027757-7027993 Caenorhabditis elegans
Exon94216   62   III: 7028041-7028102 Caenorhabditis elegans
Exon94218   94   III: 7028487-7028580 Caenorhabditis elegans
Exon94220   487   III: 7028717-7029203 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4a.1 7023642 7029203 -1

1 Sequence

Length
4511

1 Sequence Ontology Term

Identifier Name Description
transcript