WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11H8.4b.1 Sequence Name  F11H8.4b.1
Length (nt)  4519   Chromosome Location  III: 7023642-7029205
Chromosome . Primary Identifier  III Chromosome Location . Start  7023642
Chromosome Location . End  7029205 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11H8.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11H8.4b F11H8.4b 4314   III: 7023838-7024005

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4b.1 7023642 7029205 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94195   364   III: 7023642-7024005 Caenorhabditis elegans
Exon94196   422   III: 7024051-7024472 Caenorhabditis elegans
Exon94199   506   III: 7024518-7025023 Caenorhabditis elegans
Exon94201   535   III: 7025071-7025605 Caenorhabditis elegans
Exon94203   652   III: 7025652-7026303 Caenorhabditis elegans
Exon94205   137   III: 7026354-7026490 Caenorhabditis elegans
Exon94207   361   III: 7026538-7026898 Caenorhabditis elegans
Exon94209   283   III: 7026948-7027230 Caenorhabditis elegans
Exon94211   200   III: 7027280-7027479 Caenorhabditis elegans
Exon94213   177   III: 7027527-7027703 Caenorhabditis elegans
Exon94215   237   III: 7027757-7027993 Caenorhabditis elegans
Exon94217   62   III: 7028041-7028102 Caenorhabditis elegans
Exon94219   94   III: 7028487-7028580 Caenorhabditis elegans
Exon94221   489   III: 7028717-7029205 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F11H8.4b.1 7023642 7029205 -1

1 Sequence

Length
4519

1 Sequence Ontology Term

Identifier Name Description
transcript