WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.5.1 Sequence Name  B0280.5.1
Length (nt)  1723   Chromosome Location  III: 7102092-7103990
Chromosome . Primary Identifier  III Chromosome Location . Start  7102092
Chromosome Location . End  7103990 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015102 cpg-2 B0280.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.5 B0280.5 1575   III: 7102236-7102438

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.5.1 7102092 7103990 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94329   347   III: 7102092-7102438 Caenorhabditis elegans
Exon94330   276   III: 7102483-7102758 Caenorhabditis elegans
Exon94331   687   III: 7102805-7103491 Caenorhabditis elegans
Exon94332   342   III: 7103535-7103876 Caenorhabditis elegans
Exon94333   71   III: 7103920-7103990 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.5.1 7102092 7103990 -1

1 Sequence

Length
1723

1 Sequence Ontology Term

Identifier Name Description
transcript