WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.2.1 Sequence Name  B0280.2.1
Length (nt)  2007   Chromosome Location  III: 7124664-7128382
Chromosome . Primary Identifier  III Chromosome Location . Start  7124664
Chromosome Location . End  7128382 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015100 B0280.2 B0280.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.2 B0280.2 1884   III: 7124687-7124767

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.2.1 7124664 7128382 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94369   104   III: 7124664-7124767 Caenorhabditis elegans
Exon94370   93   III: 7124854-7124946 Caenorhabditis elegans
Exon94371   92   III: 7125170-7125261 Caenorhabditis elegans
Exon94372   134   III: 7125307-7125440 Caenorhabditis elegans
Exon94373   188   III: 7125834-7126021 Caenorhabditis elegans
Exon94374   147   III: 7126087-7126233 Caenorhabditis elegans
Exon94375   199   III: 7126330-7126528 Caenorhabditis elegans
Exon94376   401   III: 7127134-7127534 Caenorhabditis elegans
Exon94377   303   III: 7127674-7127976 Caenorhabditis elegans
Exon94378   346   III: 7128037-7128382 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.2.1 7124664 7128382 1

1 Sequence

Length
2007

1 Sequence Ontology Term

Identifier Name Description
transcript