WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0280.12b.1 Sequence Name  B0280.12b.1
Length (nt)  3104   Chromosome Location  III: 7138640-7144959
Chromosome . Primary Identifier  III Chromosome Location . Start  7138640
Chromosome Location . End  7144959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0280.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001613 glr-2 B0280.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0280.12b B0280.12b 2934   III: 7138683-7139064

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0280.12b.1 7138640 7144959 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon94501   425   III: 7138640-7139064 Caenorhabditis elegans
Exon94504   201   III: 7139157-7139357 Caenorhabditis elegans
Exon94506   95   III: 7139752-7139846 Caenorhabditis elegans
Exon94508   101   III: 7139894-7139994 Caenorhabditis elegans
Exon94510   98   III: 7140039-7140136 Caenorhabditis elegans
Exon94512   161   III: 7140183-7140343 Caenorhabditis elegans
Exon94515   195   III: 7140811-7141005 Caenorhabditis elegans
Exon94517   151   III: 7141070-7141220 Caenorhabditis elegans
Exon94520   209   III: 7141516-7141724 Caenorhabditis elegans
Exon94523   268   III: 7141768-7142035 Caenorhabditis elegans
Exon94527   156   III: 7142603-7142758 Caenorhabditis elegans
Exon94529   92   III: 7142802-7142893 Caenorhabditis elegans
Exon94530   115   III: 7142938-7143052 Caenorhabditis elegans
Exon94532   113   III: 7143232-7143344 Caenorhabditis elegans
Exon94534   80   III: 7143394-7143473 Caenorhabditis elegans
Exon94536   166   III: 7143517-7143682 Caenorhabditis elegans
Exon94539   95   III: 7143897-7143991 Caenorhabditis elegans
Exon94541   124   III: 7144042-7144165 Caenorhabditis elegans
Exon94543   56   III: 7144258-7144313 Caenorhabditis elegans
Exon94545   203   III: 7144757-7144959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0280.12b.1 7138640 7144959 -1

1 Sequence

Length
3104

1 Sequence Ontology Term

Identifier Name Description
transcript